Basic Information
Locus ID:
gene:TRIDC7AG035330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
UBA-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 273738390 | 273743587 | - | gene:TRIDC7AG035330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 63,930.50 Da | 61.24 | 69.50 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14351 | UBA_Ubx1_like | 30 | 66 | 4.96317E-15 | - |
| CDD | cd01767 | UBX | 502 | 576 | 1.59928E-20 | - |
| Pfam | PF00789 | UBX domain | 497 | 576 | 3.7E-19 | IPR001012 |
| Pfam | PF14555 | UBA-like domain | 30 | 71 | 1.4E-13 | - |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 459 | 576 | 3.88E-23 | IPR029071 |
| SUPERFAMILY | SSF46934 | UBA-like | 26 | 68 | 1.61E-7 | IPR009060 |
| Gene3D | G3DSA:3.10.20.90 | - | 497 | 578 | 2.3E-26 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 22 | 72 | 2.8E-10 | - |
| SMART | SM00166 | ubx_3 | 493 | 577 | 9.4E-13 | IPR001012 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 496 | 574 | 18.959837 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 275 | - | - |
| Coils | Coil | Coil | 426 | 446 | - | - |
| Coils | Coil | Coil | 455 | 484 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11740.1 | Ubiquitin-like superfamily protein. Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein. | 0 |
| RefSeq | XP_020185354.2 | LOW QUALITY PROTEIN: plant UBX domain-containing protein 8 [Aegilops tauschii subsp. strangulata] | 0 |
| F4JPR7 | Plant UBX domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUX8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6REQ2 | UBX domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG035330.