Basic Information
Locus ID:
gene:TRIDC7AG033430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBP2
Description:
Ubiquitinyl hydrolase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 247593207 | 247598912 | - | gene:TRIDC7AG033430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 123,230.18 Da | 48.36 | 65.30 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 471 | 1098 | 1.0E-40 | IPR001394 |
| SUPERFAMILY | SSF57850 | RING/U-box | 327 | 402 | 2.35E-6 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 467 | 1100 | 1.75E-68 | IPR038765 |
| SUPERFAMILY | SSF57850 | RING/U-box | 127 | 194 | 8.12E-5 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 830 | 1106 | 3.5E-34 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 457 | 661 | 3.4E-30 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 470 | 1101 | 35.411098 | IPR028889 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 334 | 406 | 11.323589 | IPR001607 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 121 | 199 | 10.943171 | IPR001607 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 1036 | 1054 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 471 | 486 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 898 | 961 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 968 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 839 | 859 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04860.1 | ubiquitin-specific protease 2. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_048540649.1 | ubiquitin carboxyl-terminal hydrolase 16-like, partial [Triticum urartu] | 0 |
| Q8W4N3 | Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=UBP2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6RIB3 | Ubiquitinyl hydrolase 1 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG033430.