Basic Information
Locus ID:
gene:TRIDC7AG033420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBP2
Description:
Ubiquitinyl hydrolase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 247253657 | 247258432 | + | gene:TRIDC7AG033420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 112,384.11 Da | 48.05 | 65.51 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 381 | 1005 | 8.6E-42 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 377 | 1007 | 6.67E-68 | IPR038765 |
| SUPERFAMILY | SSF57850 | RING/U-box | 55 | 134 | 9.65E-5 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 240 | 312 | 1.07E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 210 | 331 | 1.0E-5 | IPR013083 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 754 | 1012 | 3.4E-32 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 366 | 578 | 7.6E-30 | - |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 70 | 139 | 12.420094 | IPR001607 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 244 | 316 | 10.697018 | IPR001607 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 380 | 1008 | 36.684277 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 943 | 961 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 381 | 396 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 862 | 877 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 813 | 886 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 813 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 733 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 753 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04860.1 | ubiquitin-specific protease 2. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037456468.1 | ubiquitin carboxyl-terminal hydrolase 16-like [Triticum dicoccoides] | 0 |
| Q8W4N3 | Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=UBP2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6RE82 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG033420.