Basic Information
Locus ID:
gene:TRIDC7AG033380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBP2
Description:
Ubiquitinyl hydrolase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 245561332 | 245565357 | - | gene:TRIDC7AG033380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 45,718.07 Da | 52.00 | 70.68 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 30 | 407 | 1.2E-23 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 106 | 409 | 6.67E-32 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 140 | 411 | 1.1E-33 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 410 | 19.274607 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 344 | 362 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 184 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044428941.1 | ubiquitin carboxyl-terminal hydrolase 2-like isoform X1 [Triticum aestivum] | 0 |
| Q6PAW2 | Ubiquitin carboxyl-terminal hydrolase 16 OS=Xenopus laevis OX=8355 GN=usp16 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453RLX4 | USP domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG033380.