Basic Information
Locus ID:
gene:TRIDC7AG033180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
zinc-RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 243772655 | 243774739 | + | gene:TRIDC7AG033180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 21,352.96 Da | 63.39 | 64.90 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 142 | 179 | 1.2E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 137 | 193 | 1.46E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 194 | 2.6E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 142 | 179 | 8.1E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 142 | 180 | 12.961374 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 157 | 166 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 133 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037460955.1 | E3 ubiquitin-protein ligase RNF4-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6RI94 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG033180.