HalophFGD

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Basic Information
Locus ID: gene:TRIDC7AG032950
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: atbpm1,bpm1
Maps and Mapping Data
Chromosome Start End Strand ID
7A 241336537 241338181 - gene:TRIDC7AG032950
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.76 35,965.19 Da 44.91 89.11 -0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18280 BTB_POZ_BPM_plant 144 258 2.27949E-47 -
CDD cd00121 MATH 17 130 3.16401E-15 IPR002083
Pfam PF00651 BTB/POZ domain 151 258 1.8E-24 IPR000210
SUPERFAMILY SSF49599 TRAF domain-like 13 132 1.6E-20 -
SUPERFAMILY SSF54695 POZ domain 137 260 1.88E-30 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 133 292 5.4E-50 IPR011333
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 132 1.5E-19 IPR008974
SMART SM00225 BTB_4 158 262 3.5E-24 IPR000210
ProSiteProfiles PS50144 MATH/TRAF domain profile. 3 129 9.72846 IPR002083
ProSiteProfiles PS50097 BTB domain profile. 158 225 18.368662 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G19000.1 BTB-POZ and MATH domain 1. 0
RefSeq XP_037456635.1 BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] 0
Swiss-Prot Q8L765 BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 0
TrEMBL A0A3B6REQ0 BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC7AG032950.

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