Basic Information
Locus ID:
gene:TRIDC7AG031210
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin-protein ligase UPL5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 217547600 | 217553962 | - | gene:TRIDC7AG031210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 96,512.01 Da | 41.86 | 96.64 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 497 | 860 | 1.36738E-104 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 547 | 853 | 2.6E-64 | IPR000569 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 8 | 91 | 3.2E-5 | IPR029071 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 494 | 848 | 3.27E-83 | IPR035983 |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 618 | 700 | 6.9E-57 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 496 | 725 | 6.9E-57 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 743 | 860 | 7.5E-28 | - |
| SMART | SM00119 | hect_3 | 516 | 860 | 4.1E-63 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 518 | 862 | 70.472015 | IPR000569 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12570.1 | ubiquitin protein ligase 5. Knock-out mutants showed accelerated senescence of leaves. | 0 |
| RefSeq | XP_037457053.1 | E3 ubiquitin-protein ligase UPL5-like [Triticum dicoccoides] | 0 |
| Q9SU29 | E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana OX=3702 GN=UPL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RHQ7 | HECT domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG031210.