Basic Information
Locus ID:
gene:TRIDC7AG031090
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
metal ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 216303084 | 216318412 | - | gene:TRIDC7AG031090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 99,962.25 Da | 50.97 | 68.49 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15565 | PHD2_NSD | 74 | 138 | 2.18408E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 14 | 71 | 4.6E-5 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 72 | 161 | 5.5E-8 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 671 | 701 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 718 | 750 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 671 | 697 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 718 | 778 | - | - |
| Coils | Coil | Coil | 898 | 898 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55390.1 | ENHANCED DOWNY MILDEW 2. Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression. | 0 |
| RefSeq | XP_037457460.1 | protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Triticum dicoccoides] | 0 |
| F4K3G5 | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana OX=3702 GN=EDM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RDL9 | Protein ENHANCED DOWNY MILDEW 2-like OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG031090.