Basic Information
Locus ID:
gene:TRIDC7AG030000
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 203416757 | 203422096 | - | gene:TRIDC7AG030000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 83,738.77 Da | 45.09 | 98.28 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 273 | 314 | 1.18411E-21 | - |
| Pfam | PF04564 | U-box domain | 270 | 340 | 1.7E-18 | IPR003613 |
| SUPERFAMILY | SSF48371 | ARM repeat | 438 | 690 | 9.75E-18 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 265 | 341 | 7.65E-25 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 424 | 704 | 1.1E-19 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 255 | 346 | 2.3E-23 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 272 | 335 | 2.7E-27 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 268 | 342 | 38.055969 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67530.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_037459665.1 | U-box domain-containing protein 7-like [Triticum dicoccoides] | 0 |
| Q9CAG5 | U-box domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=PUB7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RD96 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG030000.