Basic Information
Locus ID:
gene:TRIDC7AG028480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PHD-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 191365818 | 191371323 | - | gene:TRIDC7AG028480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 50,278.38 Da | 57.56 | 63.28 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15489 | PHD_SF | 205 | 251 | 1.45336E-10 | - |
| Pfam | PF00628 | PHD-finger | 205 | 252 | 5.5E-8 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 199 | 263 | 3.77E-12 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 193 | 272 | 1.2E-10 | IPR013083 |
| SMART | SM00249 | PHD_3 | 204 | 252 | 1.3E-7 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 202 | 254 | 9.1429 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 205 | 251 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 53 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20280.3 | - | 0 |
| RefSeq | XP_044426287.1 | uncharacterized protein LOC123150511 [Triticum aestivum] | 0 |
| Q5PNS0 | PHD finger protein At3g20280 OS=Arabidopsis thaliana OX=3702 GN=At3g20280 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7R1E0 | PHD-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG028480.