Basic Information
Locus ID:
gene:TRIDC7AG027320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
SOBIR1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 180340462 | 180342214 | - | gene:TRIDC7AG027320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 53,468.81 Da | 49.97 | 90.12 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 179 | 411 | 9.2E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 174 | 480 | 3.91E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 275 | 485 | 1.4E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 161 | 274 | 6.5E-12 | - |
| SMART | SM00220 | serkin_6 | 176 | 473 | 1.1E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 176 | 485 | 36.767494 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 328 | 340 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 58 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31880.1 | Leucine-rich repeat protein kinase family protein. Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity. | 0 |
| RefSeq | XP_037459756.1 | leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 [Triticum dicoccoides] | 0 |
| Q9SKB2 | Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 OS=Arabidopsis thaliana OX=3702 GN=SOBIR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7V2E8 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG027320.