Basic Information
Locus ID:
gene:TRIDC7AG025550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 161466942 | 161472693 | + | gene:TRIDC7AG025550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.23 | 47,501.23 Da | 57.33 | 94.11 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 30 | 65 | 1.2E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 27 | 73 | 2.09E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 157 | 368 | 2.43E-7 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 23 | 73 | 4.7E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 165 | 379 | 2.2E-6 | IPR032675 |
| SMART | SM00256 | fbox_2 | 33 | 73 | 3.0E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 27 | 75 | 10.795695 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13570.2 | - | 0 |
| RefSeq | XP_037460921.1 | putative F-box/LRR-repeat protein At3g28410 isoform X1 [Triticum dicoccoides] | 0 |
| Q9FZ70 | F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana OX=3702 GN=At1g13570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RG92 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG025550.