Basic Information
Locus ID:
gene:TRIDC7AG024350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 151942803 | 151944360 | - | gene:TRIDC7AG024350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 39,539.15 Da | 43.21 | 83.36 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 22 | 370 | 1.0298E-43 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 144 | 177 | 1.1E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 276 | 308 | 1.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 185 | 219 | 0.0017 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 21 | 55 | 1.5E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 20 | 371 | 7.51E-47 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 268 | 372 | 3.5E-15 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 131 | 267 | 1.8E-29 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 15 | 107 | 5.8E-12 | IPR015943 |
| SMART | SM00320 | WD40_4 | 227 | 266 | 0.0052 | IPR001680 |
| SMART | SM00320 | WD40_4 | 19 | 56 | 9.5E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 63 | 101 | 2.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 181 | 220 | 6.6E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 272 | 309 | 4.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 315 | 370 | 0.057 | IPR001680 |
| SMART | SM00320 | WD40_4 | 139 | 178 | 1.0E-6 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 234 | 266 | 8.676514 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 146 | 187 | 12.346452 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 189 | 219 | 9.97376 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 26 | 65 | 9.372231 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 279 | 308 | 8.544697 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 234 | 266 | 10.307941 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 146 | 179 | 9.625601 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 279 | 308 | 10.14085 | IPR001680 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 357 | 371 | 6.2E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 207 | 221 | 6.2E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 88 | 102 | 6.2E-5 | IPR020472 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24130.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037461025.1 | protein JINGUBANG-like [Triticum dicoccoides] | 0 |
| O48716 | Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RG18 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG024350.