Basic Information
Locus ID:
gene:TRIDC7AG018980
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WLM domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 105597917 | 105603600 | + | gene:TRIDC7AG018980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 34,748.81 Da | 58.36 | 65.65 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 244 | 269 | 1.4E-5 | IPR001876 |
| Pfam | PF08325 | WLM domain | 2 | 164 | 2.8E-52 | IPR013536 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 242 | 268 | 4.06E-8 | IPR036443 |
| Gene3D | G3DSA:2.30.30.380 | - | 239 | 276 | 1.9E-8 | - |
| SMART | SM00547 | zf_4 | 277 | 301 | 0.22 | IPR001876 |
| SMART | SM00547 | zf_4 | 243 | 267 | 1.2E-4 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 275 | 304 | 8.264401 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 241 | 270 | 8.67092 | IPR001876 |
| ProSiteProfiles | PS51397 | WLM domain profile. | 1 | 164 | 43.409119 | IPR013536 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 245 | 264 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 279 | 298 | - | IPR001876 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 236 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55915.1 | zinc ion binding. | 0 |
| RefSeq | XP_037459460.1 | DNA-dependent metalloprotease WSS1-like [Triticum dicoccoides] | 0 |
| P38838 | DNA-dependent metalloprotease WSS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=WSS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RAM6 | DNA-dependent metalloprotease WSS1 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG018980.