Basic Information
Locus ID:
gene:TRIDC7AG018120
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 98651120 | 98657523 | - | gene:TRIDC7AG018120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.57 | 94,038.97 Da | 45.99 | 67.22 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 33 | 336 | 2.13522E-167 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 35 | 335 | 1.9E-56 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 33 | 337 | 2.16E-92 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 32 | 345 | 1.7E-97 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 34 | 338 | 54.208393 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 35 | 50 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 280 | 298 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 689 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 642 | 759 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 848 | 862 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 785 | 804 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 809 | 862 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 809 | 828 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 702 | 722 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 732 | 755 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 658 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57990.1 | ubiquitin-specific protease 23. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037458276.1 | ubiquitin carboxyl-terminal hydrolase 23-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9FPS4 | Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana OX=3702 GN=UBP23 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6RAE6 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG018120.