Basic Information
Locus ID:
gene:TRIDC7AG016870
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 89022884 | 89036968 | + | gene:TRIDC7AG016870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 57,025.35 Da | 39.64 | 90.33 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 36 | 275 | 1.99068E-105 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 361 | 508 | 3.0E-27 | IPR001245 |
| Pfam | PF00139 | Legume lectin domain | 36 | 287 | 3.5E-75 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 36 | 295 | 9.13E-76 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 334 | 508 | 1.36E-47 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 434 | 2.4E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 508 | 4.0E-19 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 31 | 276 | 6.1E-65 | - |
| SMART | SM00220 | serkin_6 | 358 | 508 | 4.6E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 358 | 508 | 27.170507 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 483 | 495 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_044961517.1 | L-type lectin-domain containing receptor kinase SIT2-like [Hordeum vulgare subsp. vulgare] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | F2E7I8 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG016870.