Basic Information
Locus ID:
gene:TRIDC7AG014400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 73218473 | 73222052 | - | gene:TRIDC7AG014400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 76,429.71 Da | 53.40 | 81.10 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 601 | 641 | 3.63686E-18 | - |
| Pfam | PF14559 | Tetratricopeptide repeat | 21 | 63 | 2.2E-6 | - |
| Pfam | PF04564 | U-box domain | 597 | 667 | 1.3E-18 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 327 | 529 | 4.2E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 299 | 563 | 1.75E-57 | IPR011009 |
| SUPERFAMILY | SSF48452 | TPR-like | 17 | 123 | 2.23E-27 | IPR011990 |
| SUPERFAMILY | SSF57850 | RING/U-box | 596 | 667 | 7.86E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 294 | 386 | 3.0E-22 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 12 | 133 | 6.0E-26 | IPR011990 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 388 | 579 | 2.4E-43 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 596 | 669 | 9.8E-28 | IPR013083 |
| SMART | SM00028 | tpr_5 | 11 | 44 | 9.3 | IPR019734 |
| SMART | SM00028 | tpr_5 | 45 | 78 | 0.053 | IPR019734 |
| SMART | SM00028 | tpr_5 | 79 | 112 | 6.9 | IPR019734 |
| SMART | SM00504 | Ubox_2 | 600 | 662 | 5.7E-23 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 316 | 587 | 27.976145 | IPR000719 |
| ProSiteProfiles | PS50005 | TPR repeat profile. | 11 | 44 | 8.2604 | IPR019734 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 596 | 669 | 33.721573 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 202 | - | - |
| Coils | Coil | Coil | 195 | 236 | - | - |
| Coils | Coil | Coil | 255 | 296 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037456933.1 | U-box domain-containing protein 70-like [Triticum dicoccoides] | 0 |
| Q5WA76 | U-box domain-containing protein 70 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB70 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RDP5 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG014400.