Basic Information
Locus ID:
gene:TRIDC7AG014380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 73103083 | 73107331 | - | gene:TRIDC7AG014380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 77,664.90 Da | 51.90 | 86.78 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 610 | 651 | 1.25658E-16 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 337 | 574 | 1.0E-37 | IPR001245 |
| Pfam | PF04564 | U-box domain | 606 | 677 | 8.5E-20 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 603 | 678 | 3.36E-25 | - |
| SUPERFAMILY | SSF48452 | TPR-like | 25 | 132 | 1.22E-26 | IPR011990 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 308 | 575 | 2.83E-61 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 396 | 1.3E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 397 | 598 | 2.7E-45 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 605 | 680 | 1.3E-26 | IPR013083 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 20 | 132 | 2.8E-24 | IPR011990 |
| SMART | SM00504 | Ubox_2 | 609 | 672 | 4.7E-24 | IPR003613 |
| SMART | SM00028 | tpr_5 | 88 | 121 | 2.1 | IPR019734 |
| SMART | SM00028 | tpr_5 | 54 | 87 | 0.27 | IPR019734 |
| SMART | SM00028 | tpr_5 | 20 | 53 | 10.0 | IPR019734 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 325 | 585 | 30.082111 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 605 | 679 | 37.622528 | IPR003613 |
| Coils | Coil | Coil | 204 | 245 | - | - |
| Coils | Coil | Coil | 264 | 305 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037460424.1 | U-box domain-containing protein 70-like [Triticum dicoccoides] | 0 |
| Q5WA76 | U-box domain-containing protein 70 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB70 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6R9K8 | Serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG014380.