Basic Information
Locus ID:
gene:TRIDC7AG012260
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
cellular macromolecule catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 57670391 | 57671073 | - | gene:TRIDC7AG012260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 10,071.35 Da | 44.50 | 90.11 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 19 | 83 | 3.21614E-20 | - |
| Pfam | PF00240 | Ubiquitin family | 19 | 86 | 1.9E-18 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 8 | 86 | 9.93E-22 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 6 | 91 | 4.1E-23 | - |
| SMART | SM00213 | ubq_7 | 17 | 88 | 1.5E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 17 | 92 | 19.085346 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 48 | 68 | 3.2E-13 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 27 | 47 | 3.2E-13 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 69 | 90 | 3.2E-13 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_020191905.1 | ubiquitin-like [Aegilops tauschii subsp. strangulata] | 0 |
| P69310 | Ubiquitin OS=Avena sativa OX=4498 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453QPD3 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG012260.