Basic Information
Locus ID:
gene:TRIDC7AG011990
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 56962609 | 56965610 | - | gene:TRIDC7AG011990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 78,872.48 Da | 45.62 | 81.83 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 324 | 367 | 5.75603E-6 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 444 | 706 | 3.8E-44 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 29 | 61 | 8.6E-9 | IPR025287 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 274 | 374 | 1.48E-6 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 427 | 706 | 1.27E-67 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 281 | 374 | 9.3E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 424 | 515 | 1.1E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 516 | 715 | 9.0E-51 | - |
| SMART | SM00181 | egf_5 | 327 | 374 | 0.0011 | IPR000742 |
| SMART | SM00220 | serkin_6 | 441 | 709 | 1.1E-27 | IPR000719 |
| SMART | SM00181 | egf_5 | 274 | 323 | 120.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 324 | 374 | 4.4E-10 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 441 | 709 | 35.170353 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 324 | 374 | 8.578901 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 560 | 572 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 447 | 469 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 324 | 358 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 349 | 360 | - | IPR000152 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037462021.1 | wall-associated receptor kinase 1-like [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6RD30 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG011990.