Basic Information
Locus ID:
gene:TRIDC7AG007410
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 28084793 | 28098292 | + | gene:TRIDC7AG007410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 42,254.00 Da | 46.78 | 75.61 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 15 | 51 | 8.9E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 349 | 383 | 0.006 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 10 | 389 | 4.4E-39 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 170 | 392 | 2.4E-26 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 7 | 150 | 6.4E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 12 | 51 | 1.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 303 | 342 | 29.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 54 | 96 | 110.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 257 | 296 | 44.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 345 | 384 | 1.5E-5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 352 | 385 | 11.243651 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 19 | 51 | 12.024679 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 19 | 60 | 15.821944 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 352 | 385 | 9.414692 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 371 | 385 | - | IPR019775 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29860.1 | Transducin/WD40 repeat-like superfamily protein. Encodes a WD repeat protein with seven WD repeat motifs, predicted to function in protein-protein interaction. Mutations caused defects in both embryo and seedling development. | 0 |
| RefSeq | XP_037459631.1 | protein DECREASED SIZE EXCLUSION LIMIT 1-like isoform X1 [Triticum dicoccoides] | 0 |
| F1DLK1 | Protein DECREASED SIZE EXCLUSION LIMIT 1 OS=Nicotiana benthamiana OX=4100 GN=DSE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RC52 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG007410.