Basic Information
Locus ID:
gene:TRIDC7AG006520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 24296218 | 24298083 | + | gene:TRIDC7AG006520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 34,496.80 Da | 40.68 | 78.82 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00023 | Ankyrin repeat | 97 | 127 | 2.3E-5 | IPR002110 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 10 | 82 | 1.1E-12 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 10 | 149 | 4.84E-24 | IPR036770 |
| SUPERFAMILY | SSF57850 | RING/U-box | 195 | 254 | 6.1E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 191 | 264 | 6.9E-9 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 3 | 148 | 7.3E-28 | IPR036770 |
| SMART | SM00248 | ANK_2a | 96 | 125 | 0.01 | IPR002110 |
| SMART | SM00248 | ANK_2a | 52 | 81 | 1.1E-6 | IPR002110 |
| SMART | SM00248 | ANK_2a | 10 | 39 | 0.47 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 10 | 35 | 9.409914 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 52 | 81 | 12.116116 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 200 | 249 | 10.055033 | IPR001841 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 96 | 128 | 11.54089 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 96 | 122 | 11.187517 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 10 | 35 | 9.430799 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 52 | 84 | 13.00994 | IPR002110 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 215 | 224 | - | IPR017907 |
| PRINTS | PR01415 | Ankyrin repeat signature | 11 | 26 | 1.6E-5 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 68 | 82 | 1.6E-5 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 316 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07270.1 | XB3 ortholog 3 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_037460329.1 | probable E3 ubiquitin-protein ligase XBOS36 isoform X2 [Triticum dicoccoides] | 0 |
| Q4JHE0 | Probable E3 ubiquitin-protein ligase XBOS36 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS36 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6RBT2 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG006520.