Basic Information
Locus ID:
gene:TRIDC7AG006340
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NUC153 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 23885790 | 23892098 | + | gene:TRIDC7AG006340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 81,840.78 Da | 53.70 | 73.15 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08159 | NUC153 domain | 504 | 530 | 6.7E-8 | IPR012580 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 17 | 344 | 2.24E-29 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 15 | 347 | 5.6E-22 | IPR015943 |
| SMART | SM00320 | WD40_4 | 220 | 263 | 3.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 266 | 309 | 110.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 175 | 214 | 14.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 545 | 578 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 663 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 736 | - | - |
| Coils | Coil | Coil | 462 | 482 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56990.1 | embryo sac development arrest 7. | 0 |
| RefSeq | XP_044425988.1 | nucleolar protein 10-like [Triticum aestivum] | 0 |
| Q7T0Q5 | Nucleolar protein 10 OS=Xenopus laevis OX=8355 GN=nol10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7UY46 | NUC153 domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG006340.