Basic Information
Locus ID:
gene:TRIDC7AG006110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 22539315 | 22540587 | - | gene:TRIDC7AG006110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 41,572.86 Da | 52.19 | 85.58 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 147 | 6.07079E-30 | IPR002083 |
| Pfam | PF00917 | MATH domain | 39 | 145 | 1.4E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 182 | 286 | 2.6E-19 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 148 | 5.4E-33 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 182 | 287 | 2.51E-18 | IPR011333 |
| Gene3D | G3DSA:6.10.250.3030 | - | 284 | 330 | 4.9E-8 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 149 | 3.0E-32 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 177 | 283 | 1.9E-23 | IPR011333 |
| SMART | SM00225 | BTB_4 | 183 | 287 | 2.7E-14 | IPR000210 |
| SMART | SM00061 | math_3 | 21 | 127 | 7.0E-10 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 16 | 146 | 25.581551 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 183 | 246 | 12.577702 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 0 |
| RefSeq | XP_037461915.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q9SRV1 | BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6R7V8 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG006110.