Basic Information
Locus ID:
gene:TRIDC7AG005680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 20572927 | 20576320 | + | gene:TRIDC7AG005680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.22 | 27,794.52 Da | 46.69 | 55.22 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 203 | 245 | 5.01996E-17 | - |
| Pfam | PF13639 | Ring finger domain | 202 | 245 | 4.3E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 197 | 248 | 1.32E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 160 | 249 | 9.2E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 204 | 244 | 7.7E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 204 | 245 | 12.799091 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 154 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19910.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037459000.1 | E3 ubiquitin ligase BIG BROTHER-related-like [Triticum dicoccoides] | 0 |
| Q9LT17 | E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7VI09 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG005680.