Basic Information
Locus ID:
gene:TRIDC7AG001960
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NPR1/NIM1 like defence protein C terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 5808627 | 5813546 | + | gene:TRIDC7AG001960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 63,855.31 Da | 42.64 | 93.11 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18310 | BTB_POZ_NPR_plant | 40 | 184 | 1.78119E-48 | - |
| Pfam | PF11900 | Domain of unknown function (DUF3420) | 223 | 267 | 9.0E-13 | IPR024228 |
| Pfam | PF12313 | NPR1/NIM1 like defence protein C terminal | 366 | 552 | 1.8E-75 | IPR021094 |
| Pfam | PF00651 | BTB/POZ domain | 59 | 176 | 1.7E-7 | IPR000210 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 273 | 351 | 2.1E-7 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 267 | 366 | 2.33E-14 | IPR036770 |
| SUPERFAMILY | SSF54695 | POZ domain | 45 | 184 | 8.63E-10 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 25 | 220 | 5.7E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.20 | - | 260 | 373 | 5.6E-17 | IPR036770 |
| SMART | SM00225 | BTB_4 | 60 | 186 | 8.7E-6 | IPR000210 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 324 | 349 | 8.789761 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 324 | 349 | 8.773161 | - |
| ProSiteProfiles | PS50097 | BTB domain profile. | 60 | 131 | 13.653165 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64280.1 | regulatory protein (NPR1). This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens. | 0 |
| RefSeq | XP_037411727.1 | BTB/POZ domain and ankyrin repeat-containing protein NPR1-like [Triticum dicoccoides] | 0 |
| Q9FDY4 | BTB/POZ domain and ankyrin repeat-containing protein NPR1 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR1 PE=1 SV=1 | 0 | |
| TrEMBL | M4Q637 | NPR1-like 1 protein OS=Triticum turgidum subsp. durum OX=4567 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG001960.