Basic Information
Locus ID:
gene:TRIDC7AG000300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 1142950 | 1147656 | + | gene:TRIDC7AG000300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 45,636.59 Da | 51.62 | 77.33 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 104 | 144 | 1.9E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 71 | 392 | 8.33E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 53 | 163 | 2.0E-15 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 164 | 420 | 3.2E-13 | IPR015943 |
| SMART | SM00320 | WD40_4 | 190 | 231 | 3.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 147 | 187 | 5.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 103 | 144 | 2.0E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 343 | 392 | 43.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 110 | 153 | 11.109979 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 110 | 147 | 8.887423 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 131 | 145 | - | IPR019775 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47790.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037459268.1 | WD repeat-containing protein GTS1-like [Triticum dicoccoides] | 0 |
| Q944S2 | WD repeat-containing protein GTS1 OS=Arabidopsis thaliana OX=3702 GN=GTS1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7R7U7 | WD_REPEATS_REGION domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG000300.