Basic Information
Locus ID:
gene:TRIDC7AG000090
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
zinc-ribbon
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 7A | 473208 | 477068 | - | gene:TRIDC7AG000090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 27,713.40 Da | 49.69 | 71.94 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 207 | 249 | 3.5113E-24 | - |
| Pfam | PF13639 | Ring finger domain | 207 | 249 | 6.6E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 207 | 256 | 3.53E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 169 | 255 | 4.9E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 208 | 248 | 1.8E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 208 | 249 | 12.607302 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 291 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19950.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037460546.1 | E3 ubiquitin-protein ligase RING1-like [Triticum dicoccoides] | 0 |
| P0CH30 | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6TG32 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC7AG000090.