Basic Information
Locus ID:
gene:TRIDC6BG073130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 701371138 | 701386622 | + | gene:TRIDC6BG073130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 61,772.11 Da | 37.48 | 90.11 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 177 | 213 | 3.47942E-7 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 177 | 219 | 6.4E-7 | IPR001881 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 288 | 550 | 7.7E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 553 | 2.05E-64 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 174 | 221 | 7.87E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 361 | 559 | 4.8E-50 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 121 | 220 | 2.3E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 265 | 360 | 5.2E-22 | - |
| SMART | SM00181 | egf_5 | 122 | 176 | 240.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 180 | 220 | 8.8E-4 | IPR000742 |
| SMART | SM00179 | egfca_6 | 177 | 220 | 1.3E-9 | IPR001881 |
| SMART | SM00220 | serkin_6 | 286 | 551 | 5.2E-26 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 177 | 220 | 11.292006 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 286 | 551 | 34.152706 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 292 | 314 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 405 | 417 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 195 | 206 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 177 | 204 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037454070.1 | wall-associated receptor kinase 1-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6YPF0 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG073130.