Basic Information
Locus ID:
gene:TRIDC6BG072610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
EFR
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 699982789 | 699986429 | + | gene:TRIDC6BG072610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 118,996.16 Da | 37.20 | 108.36 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 75 | 96 | 0.13 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 147 | 169 | 0.57 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 779 | 1010 | 2.6E-39 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 30 | 352 | 1.49E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 416 | 697 | 9.18E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 760 | 1078 | 1.89E-65 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 7 | 135 | 4.6E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 412 | 708 | 1.8E-85 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 759 | 860 | 3.4E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 269 | 1.3E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 861 | 1095 | 9.0E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 270 | 411 | 2.7E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 289 | 313 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 490 | 514 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 634 | 658 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 586 | 610 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 216 | 239 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 240 | 264 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 387 | 410 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 72 | 96 | 280.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 777 | 1086 | 1.3E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 777 | 1089 | 35.156216 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 909 | 921 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 783 | 808 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_048548041.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum urartu] | 0 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PVV9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG072610.