HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC6BG070010
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
6B 691203474 691206171 - gene:TRIDC6BG070010
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.29 43,213.59 Da 47.61 97.18 -0.19
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 107 256 8.3E-33 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 90 343 1.62E-58 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 178 256 1.5E-26 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 257 363 2.3E-12 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 70 177 1.1E-27 -
SMART SM00220 serkin_6 104 343 4.5E-13 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 104 380 25.785376 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 223 235 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 110 131 - IPR017441
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G32300.1 S-domain-2 5. 0
RefSeq XP_048536979.1 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Triticum urartu] 0
Swiss-Prot Q8RWZ5 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 0
TrEMBL A0A3B6PST4 Non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC6BG070010.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.