Basic Information
Locus ID:
gene:TRIDC6BG069990
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 691173367 | 691176831 | - | gene:TRIDC6BG069990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 87,214.43 Da | 49.10 | 88.54 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 303 | 350 | 7.93525E-11 | - |
| CDD | cd00028 | B_lectin | 46 | 120 | 7.82443E-23 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 314 | 359 | 1.9E-4 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 48 | 130 | 2.3E-20 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 484 | 727 | 1.8E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 475 | 729 | 6.74E-64 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 46 | 168 | 7.46E-27 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 473 | 537 | 2.7E-19 | - |
| Gene3D | G3DSA:2.90.10.30 | - | 32 | 167 | 4.1E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 538 | 744 | 2.0E-54 | - |
| SMART | SM00220 | serkin_6 | 468 | 733 | 7.5E-19 | IPR000719 |
| SMART | SM00108 | blect_4 | 20 | 120 | 6.0E-13 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 474 | 764 | 1.9E-113 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 28 | 399 | 4.1E-56 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 1 | 118 | 14.333223 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 733 | 31.438976 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 306 | 383 | 7.852495 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 580 | 592 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_037455545.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Triticum dicoccoides] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453Q471 | Receptor-like serine/threonine-protein kinase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG069990.