Basic Information
Locus ID:
gene:TRIDC6BG069940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 691019306 | 691022699 | + | gene:TRIDC6BG069940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 42,802.28 Da | 55.94 | 87.18 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09617 | Peptidase_C12_UCH37_BAP1 | 47 | 264 | 1.65541E-129 | - |
| Pfam | PF18031 | Ubiquitin carboxyl-terminal hydrolases | 319 | 359 | 7.2E-20 | IPR041507 |
| Pfam | PF01088 | Ubiquitin carboxyl-terminal hydrolase, family 1 | 47 | 250 | 7.0E-68 | IPR001578 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 46 | 267 | 1.67E-68 | IPR038765 |
| Gene3D | G3DSA:1.20.58.860 | - | 269 | 354 | 1.3E-24 | - |
| Gene3D | G3DSA:3.40.532.10 | - | 39 | 268 | 5.6E-83 | IPR036959 |
| PIRSF | PIRSF038120 | Uch | 42 | 378 | 1.4E-127 | IPR017390 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 196 | 207 | 3.2E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 120 | 137 | 3.2E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 49 | 66 | 3.2E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 84 | 96 | 3.2E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 212 | 222 | 3.2E-10 | IPR001578 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 38 | - | - |
| Coils | Coil | Coil | 262 | 296 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65650.1 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1. | 0 |
| RefSeq | XP_037454591.1 | ubiquitin carboxyl-terminal hydrolase 2-like [Triticum dicoccoides] | 0 |
| O04482 | Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=UCH2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453Q4H8 | Ubiquitin carboxyl-terminal hydrolase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG069940.