Basic Information
Locus ID:
gene:TRIDC6BG069500
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 689706980 | 689710779 | - | gene:TRIDC6BG069500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.23 | 19,216.94 Da | 60.85 | 63.33 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 119 | 160 | 2.9E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 111 | 166 | 2.83E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 79 | 164 | 1.6E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 120 | 160 | 2.0E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 120 | 161 | 12.430266 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 110 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00335.1 | RING-H2 finger B1A. | 0 |
| RefSeq | XP_037449055.1 | probable E3 ubiquitin-protein ligase RHB1A [Triticum dicoccoides] | 0 |
| Q2HIJ8 | Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1 | 0 | |
| TrEMBL | W5GZD9 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG069500.