Basic Information
Locus ID:
gene:TRIDC6BG069330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 688929519 | 688946878 | - | gene:TRIDC6BG069330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 21,088.90 Da | 54.09 | 93.03 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 113 | 156 | 3.07247E-15 | - |
| Pfam | PF13639 | Ring finger domain | 113 | 156 | 7.7E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 95 | 161 | 6.31E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 90 | 164 | 1.3E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 114 | 155 | 1.4E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 114 | 156 | 12.046688 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04360.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037451089.1 | RING-H2 finger protein ATL1-like [Triticum dicoccoides] | 0 |
| P93823 | RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PTW8 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG069330.