Basic Information
Locus ID:
gene:TRIDC6BG068590
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 686141039 | 686143487 | + | gene:TRIDC6BG068590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 59,990.23 Da | 39.81 | 83.30 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 75 | 332 | 1.36169E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 75 | 333 | 2.9E-71 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 451 | 513 | 5.1E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 381 | 442 | 3.9E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 362 | 514 | 2.11E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 58 | 358 | 1.62E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 341 | 515 | 4.5E-59 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 161 | 340 | 2.7E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 77 | 160 | 5.9E-26 | - |
| SMART | SM00220 | serkin_6 | 75 | 333 | 8.0E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 487 | 515 | 6.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 380 | 408 | 3.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 453 | 481 | 0.0011 | IPR002048 |
| SMART | SM00054 | efh_1 | 417 | 445 | 3.6E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 488 | 518 | 11.695971 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 75 | 333 | 46.110069 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 449 | 484 | 14.150764 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 376 | 411 | 15.88028 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 413 | 448 | 11.835447 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 496 | 508 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 462 | 474 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 81 | 108 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 389 | 401 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 195 | 207 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 426 | 438 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38230.2 | calcium-dependent protein kinase 26. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037450332.1 | calcium-dependent protein kinase 26-like [Triticum dicoccoides] | 0 |
| Q9FXQ3 | Calcium-dependent protein kinase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK13 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453Q8G4 | Calcium-dependent protein kinase 26 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG068590.