Basic Information
Locus ID:
gene:TRIDC6BG067830
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Functions as component of the Arp2 3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 682794920 | 682800603 | - | gene:TRIDC6BG067830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 37,810.46 Da | 34.11 | 83.97 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 107 | 136 | 6.4E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2 | 335 | 8.97E-35 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 332 | 5.1E-117 | IPR015943 |
| SMART | SM00320 | WD40_4 | 97 | 137 | 9.4E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 11 | 47 | 0.58 | IPR001680 |
| SMART | SM00320 | WD40_4 | 158 | 197 | 5.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 52 | 91 | 19.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 286 | 331 | 15.0 | IPR001680 |
| PIRSF | PIRSF038093 | ARPC1 | 1 | 337 | 1.7E-127 | IPR017383 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 105 | 137 | 9.706414 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 289 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31300.1 | actin-related protein C1B. putative ARP2/3 protein complex subunit p41 | 0 |
| RefSeq | XP_037451082.1 | actin-related protein 2/3 complex subunit 1B-like [Triticum dicoccoides] | 0 |
| Q9SJW6 | Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=ARPC1B PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PUZ2 | Actin-related protein 2/3 complex subunit OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG067830.