Basic Information
Locus ID:
gene:TRIDC6BG067560
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 680144103 | 680150405 | - | gene:TRIDC6BG067560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 151,219.77 Da | 39.11 | 98.59 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1029 | 1294 | 2.53051E-84 | - |
| Pfam | PF00069 | Protein kinase domain | 1023 | 1226 | 2.9E-44 | IPR000719 |
| Pfam | PF00931 | NB-ARC domain | 202 | 419 | 8.0E-33 | IPR002182 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1005 | 1294 | 1.62E-73 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 178 | 448 | 5.58E-50 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 533 | 851 | 9.18E-18 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 434 | 517 | 2.7E-7 | IPR036388 |
| Gene3D | G3DSA:1.10.8.430 | - | 343 | 433 | 3.2E-9 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 173 | 333 | 1.5E-23 | IPR027417 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 996 | 1098 | 3.0E-34 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 12 | 132 | 1.1E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1099 | 1312 | 3.6E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 525 | 874 | 1.4E-16 | IPR032675 |
| SMART | SM00382 | AAA_5 | 206 | 344 | 0.0076 | IPR003593 |
| SMART | SM00220 | serkin_6 | 1023 | 1306 | 7.9E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1023 | 1280 | 35.311691 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1145 | 1157 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 281 | 295 | 4.6E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 209 | 224 | 4.6E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 704 | 720 | 4.6E-11 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 380 | 394 | 4.6E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1324 | 1360 | - | - |
| Coils | Coil | Coil | 119 | 139 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_037454250.1 | disease resistance protein RGA5-like [Triticum dicoccoides] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I7BCR8 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG067560.