Basic Information
Locus ID:
gene:TRIDC6BG065510
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 669184098 | 669190025 | - | gene:TRIDC6BG065510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 81,741.73 Da | 38.78 | 80.98 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 311 | 345 | 3.42771E-6 | - |
| CDD | cd14066 | STKc_IRAK | 445 | 711 | 8.15719E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 442 | 710 | 8.9E-45 | IPR001245 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 38 | 92 | 2.2E-10 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 311 | 346 | 1.84E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 413 | 713 | 2.7E-74 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 259 | 352 | 3.8E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 414 | 514 | 2.1E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 515 | 732 | 1.2E-53 | - |
| SMART | SM00179 | egfca_6 | 311 | 353 | 5.3E-7 | IPR001881 |
| SMART | SM00220 | serkin_6 | 439 | 713 | 2.1E-32 | IPR000719 |
| SMART | SM00181 | egf_5 | 314 | 353 | 1.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 262 | 310 | 22.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 439 | 722 | 37.332855 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 311 | 348 | 9.950991 | IPR000742 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 445 | 468 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 561 | 573 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037453637.1 | wall-associated receptor kinase 1-like [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6PSC2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG065510.