Basic Information
Locus ID:
gene:TRIDC6BG065420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ribonuclease 2-5A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 668747747 | 668755793 | - | gene:TRIDC6BG065420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 97,855.11 Da | 44.15 | 87.92 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10422 | RNase_Ire1 | 754 | 879 | 8.64626E-65 | - |
| Pfam | PF00069 | Protein kinase domain | 484 | 750 | 2.2E-41 | IPR000719 |
| Pfam | PF06479 | Ribonuclease 2-5A | 756 | 879 | 1.0E-40 | IPR010513 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 485 | 755 | 7.42E-59 | IPR011009 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 105 | 211 | 1.28E-5 | IPR011047 |
| Gene3D | G3DSA:1.20.1440.180 | KEN domain | 754 | 882 | 4.1E-45 | IPR038357 |
| Gene3D | G3DSA:2.130.10.10 | - | 97 | 277 | 3.0E-5 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 572 | 752 | 7.1E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 474 | 554 | 1.4E-29 | - |
| SMART | SM00220 | serkin_6 | 482 | 750 | 2.3E-40 | IPR000719 |
| SMART | SM00580 | PGNneu | 812 | 866 | 1.2E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 482 | 750 | 37.304585 | IPR000719 |
| ProSiteProfiles | PS51392 | KEN domain profile. | 753 | 881 | 36.455456 | IPR010513 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 612 | 624 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17520.1 | Endoribonuclease/protein kinase IRE1-like. Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants. | 0 |
| RefSeq | XP_037453616.1 | serine/threonine-protein kinase/endoribonuclease IRE1-like [Triticum dicoccoides] | 0 |
| Q7XIT1 | Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Oryza sativa subsp. japonica OX=39947 GN=IRE1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PRQ2 | non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG065420.