Basic Information
Locus ID:
gene:TRIDC6BG063220
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 655281438 | 655285853 | + | gene:TRIDC6BG063220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 55,439.74 Da | 56.71 | 73.25 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 450 | 493 | 2.27725E-18 | - |
| Pfam | PF13639 | Ring finger domain | 450 | 493 | 7.0E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 437 | 497 | 3.89E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 411 | 498 | 5.0E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 451 | 492 | 1.9E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 451 | 493 | 12.813844 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 221 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45290.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037453124.1 | uncharacterized protein LOC119323544 [Triticum dicoccoides] | 0 |
| P0DPR2 | E3 ubiquitin-protein ligase RNF43 OS=Xenopus tropicalis OX=8364 GN=rnf43 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PRS8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG063220.