Basic Information
Locus ID:
gene:TRIDC6BG062800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 652221536 | 652230522 | - | gene:TRIDC6BG062800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.12 | 159,208.17 Da | 46.19 | 88.89 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13980 | STKc_Vps15 | 18 | 306 | 1.78807E-157 | - |
| Pfam | PF00069 | Protein kinase domain | 77 | 296 | 1.7E-20 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1019 | 1054 | 6.5E-6 | IPR001680 |
| SUPERFAMILY | SSF48371 | ARM repeat | 432 | 827 | 1.64E-31 | IPR016024 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 297 | 4.78E-36 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1016 | 1435 | 1.32E-30 | IPR036322 |
| Gene3D | G3DSA:1.25.10.10 | - | 415 | 607 | 3.2E-9 | IPR011989 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 112 | 301 | 3.2E-30 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 633 | 829 | 1.2E-19 | IPR011989 |
| Gene3D | G3DSA:2.130.10.10 | - | 990 | 1121 | 8.8E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1126 | 1435 | 3.3E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1015 | 1054 | 2.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1390 | 1435 | 0.53 | IPR001680 |
| SMART | SM00220 | serkin_6 | 29 | 298 | 3.1E-11 | IPR000719 |
| SMART | SM00320 | WD40_4 | 1065 | 1102 | 74.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1306 | 1340 | 77.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1163 | 1204 | 1.6 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 29 | 314 | 21.304897 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1022 | 1056 | 14.318126 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1022 | 1056 | 11.840134 | - |
| ProSiteProfiles | PS50077 | HEAT repeat profile. | 520 | 557 | 8.5502 | IPR021133 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1402 | 1435 | 9.467419 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1422 | 1435 | 9.639578 | IPR001680 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 148 | 160 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 977 | 1000 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 967 | 1000 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 426 | - | - |
| Coils | Coil | Coil | 68 | 88 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29380.1 | protein kinase family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037453023.1 | serine/threonine-protein kinase VPS15-like [Triticum dicoccoides] | 0 |
| Q9M0E5 | Serine/threonine-protein kinase VPS15 OS=Arabidopsis thaliana OX=3702 GN=VPS15 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PTU8 | non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG062800.