Basic Information
Locus ID:
gene:TRIDC6BG062400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 649024581 | 649030645 | + | gene:TRIDC6BG062400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 113,121.88 Da | 52.80 | 69.84 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 24 | 328 | 2.09608E-161 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 26 | 327 | 1.2E-54 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 24 | 329 | 4.12E-90 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 22 | 341 | 2.5E-93 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 25 | 330 | 52.44883 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 272 | 290 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 26 | 41 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 881 | 908 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 821 | 840 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1014 | 1037 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 988 | 1037 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 850 | 934 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 402 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 988 | 1004 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 497 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57990.1 | ubiquitin-specific protease 23. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037452905.1 | ubiquitin carboxyl-terminal hydrolase 23-like [Triticum dicoccoides] | 0 |
| Q9FPS4 | Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana OX=3702 GN=UBP23 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6PTS6 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG062400.