Basic Information
Locus ID:
gene:TRIDC6BG060580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 637668375 | 637675357 | - | gene:TRIDC6BG060580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 120,558.13 Da | 50.41 | 67.05 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 885 | 1097 | 3.58487E-82 | - |
| CDD | cd06410 | PB1_UP2 | 91 | 188 | 1.87286E-33 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 880 | 1096 | 4.2E-50 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 103 | 188 | 9.0E-16 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 104 | 194 | 2.12E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 864 | 1096 | 6.32E-63 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 108 | 191 | 3.6E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 860 | 1097 | 1.3E-63 | - |
| SMART | SM00220 | serkin_6 | 879 | 1097 | 9.8E-33 | IPR000719 |
| SMART | SM00666 | PB1_new | 102 | 188 | 6.0E-28 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 879 | 1098 | 37.884079 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 885 | 906 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1004 | 1016 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1069 | 1091 | 7.0E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 961 | 974 | 7.0E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 998 | 1016 | 7.0E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 725 | 753 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 806 | 862 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 828 | 851 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 552 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 576 | 596 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 725 | 740 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 552 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57610.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_037452551.1 | uncharacterized protein LOC119323077 [Triticum dicoccoides] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NVW1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG060580.