Basic Information
Locus ID:
gene:TRIDC6BG060500
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex, cyclosome, subunit 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 636871991 | 636947459 | + | gene:TRIDC6BG060500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 88,175.31 Da | 47.26 | 92.04 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12896 | Anaphase-promoting complex, cyclosome, subunit 4 | 284 | 485 | 2.7E-54 | IPR024790 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 51 | 136 | 2.4E-26 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 40 | 266 | 2.5E-20 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 24 | 265 | 4.4E-15 | IPR015943 |
| SMART | SM00320 | WD40_4 | 74 | 112 | 0.0012 | IPR001680 |
| SMART | SM00320 | WD40_4 | 115 | 160 | 84.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 87 | 121 | 8.503359 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21530.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037454596.1 | anaphase-promoting complex subunit 4-like isoform X2 [Triticum dicoccoides] | 0 |
| O65418 | Anaphase-promoting complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=APC4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6PQJ1 | Anaphase-promoting complex subunit 4 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG060500.