Basic Information
Locus ID:
gene:TRIDC6BG058020
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 619915750 | 619918431 | + | gene:TRIDC6BG058020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 94,749.17 Da | 46.56 | 83.93 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 543 | 828 | 1.00303E-85 | - |
| CDD | cd01098 | PAN_AP_plant | 341 | 429 | 4.2703E-10 | - |
| CDD | cd00028 | B_lectin | 52 | 160 | 1.09126E-16 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 87 | 170 | 8.0E-16 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 541 | 820 | 7.4E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 519 | 827 | 9.04E-73 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 88 | 211 | 3.01E-18 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 613 | 838 | 1.1E-53 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 50 | 158 | 2.7E-9 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 510 | 612 | 1.1E-29 | - |
| SMART | SM00108 | blect_4 | 46 | 160 | 2.9E-13 | IPR001480 |
| SMART | SM00220 | serkin_6 | 537 | 826 | 2.2E-30 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 28 | 879 | 4.9E-180 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 341 | 430 | 7.741363 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 537 | 830 | 36.498947 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 40 | 158 | 9.486761 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 543 | 566 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 657 | 669 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 738 | 762 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 745 | 762 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35370.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037450273.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Triticum dicoccoides] | 0 |
| O65238 | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana OX=3702 GN=At5g35370 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6PSW1 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG058020.