Basic Information
Locus ID:
gene:TRIDC6BG057940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 619254677 | 619255879 | - | gene:TRIDC6BG057940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 37,310.73 Da | 68.45 | 55.77 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 199 | 241 | 1.10015E-25 | - |
| Pfam | PF13639 | Ring finger domain | 199 | 241 | 2.4E-12 | IPR001841 |
| Pfam | PF14369 | zinc-ribbon | 18 | 51 | 1.2E-10 | IPR039525 |
| SUPERFAMILY | SSF57850 | RING/U-box | 179 | 245 | 1.92E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 161 | 247 | 2.0E-23 | IPR013083 |
| SMART | SM00184 | ring_2 | 200 | 240 | 6.5E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 200 | 241 | 12.430266 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 141 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60360.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037453024.1 | E3 ubiquitin-protein ligase RZF1-like [Triticum dicoccoides] | 0 |
| O22197 | Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PRD7 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG057940.