Basic Information
Locus ID:
gene:TRIDC6BG054160
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 579131518 | 579144610 | - | gene:TRIDC6BG054160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 91,571.44 Da | 47.86 | 86.15 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 421 | 453 | 0.27 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 305 | 347 | 8.2E-4 | IPR001680 |
| Pfam | PF12657 | Transcription factor IIIC subunit delta N-term | 14 | 133 | 4.0E-8 | IPR024761 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 16 | 468 | 9.58E-20 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 210 | 511 | 3.2E-20 | IPR015943 |
| SMART | SM00320 | WD40_4 | 301 | 347 | 1.4E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 415 | 454 | 0.016 | IPR001680 |
| SMART | SM00320 | WD40_4 | 73 | 118 | 5.9 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 308 | 347 | 8.737287 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 166 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49400.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037452461.1 | uncharacterized protein LOC119323007 isoform X4 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6PQH9 | TFIIIC_delta domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG054160.