Basic Information
Locus ID:
gene:TRIDC6BG053860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the cullin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 574675507 | 574678809 | + | gene:TRIDC6BG053860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 83,720.13 Da | 45.93 | 81.76 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00888 | Cullin family | 16 | 618 | 3.7E-226 | IPR001373 |
| Pfam | PF10557 | Cullin protein neddylation domain | 650 | 711 | 2.0E-24 | IPR019559 |
| SUPERFAMILY | SSF74788 | Cullin repeat-like | 9 | 359 | 4.19E-116 | IPR016159 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 632 | 720 | 1.13E-28 | IPR036390 |
| SUPERFAMILY | SSF75632 | Cullin homology domain | 355 | 628 | 6.41E-101 | IPR036317 |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 252 | 359 | 2.2E-33 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 360 | 473 | 2.6E-44 | - |
| Gene3D | G3DSA:3.30.230.130 | Cullin; Chain C, Domain 2 | 477 | 631 | 1.1E-54 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 2 | 131 | 1.7E-42 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 132 | 251 | 8.1E-39 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 632 | 720 | 1.2E-32 | IPR036388 |
| SMART | SM00182 | cul_2 | 391 | 538 | 1.4E-71 | IPR016158 |
| SMART | SM00884 | Cullin_Nedd8_2 | 647 | 714 | 4.6E-35 | IPR019559 |
| ProSiteProfiles | PS50069 | Cullin family profile. | 361 | 589 | 56.810104 | IPR016158 |
| Coils | Coil | Coil | 212 | 232 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G26830.1 | cullin 3. Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. | 0 |
| RefSeq | XP_037450943.1 | cullin-3A-like, partial [Triticum dicoccoides] | 0 |
| Q9ZVH4 | Cullin-3A OS=Arabidopsis thaliana OX=3702 GN=CUL3A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PQE5 | CULLIN_2 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG053860.