Basic Information
Locus ID:
gene:TRIDC6BG053540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6B | 569767804 | 569772594 | + | gene:TRIDC6BG053540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 50,480.07 Da | 77.61 | 50.22 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 307 | 340 | 8.0027E-5 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 281 | 342 | 1.52E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 264 | 343 | 3.7E-9 | IPR013083 |
| SMART | SM00184 | ring_2 | 282 | 340 | 2.2E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 282 | 341 | 10.379599 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 146 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14180.2 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037456217.1 | uncharacterized protein LOC119326701 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6PRS5 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6BG053540.